He Lijun
Job Title:
Associate Professor
Research Interests:
Phylogegraphy
Population Genetics
Palaeoecology
Email:
ljhe@sklec.ecnu.edu.cn
tiger02j@hotmail.com
Telephone:
021-54836056
Address:
Zhongshan N. Road 3663,Shanghai 200062, China
Education Experience:
Ph.D. candidate (Molecular Ecology), Institute of Zoology, Chinese Academy of Sciences, Beijing, China, 2001-2005;
Master student(Animal Ecology), East China Normal University, Shanghai, China, 1998-2001;
Undergraduate (Biology), East China Normal University, Shanghai, China, 1994-1998.
Work Experience:
Associate professor, State Key Laboratory of Estuarine and Coastal Research, East China Normal University, Shanghai, China, 2014-present;
Visiting Scholar, Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, MA, USA, 2013-2014;
Assistant professor, State Key Laboratory of Estuarine and Coastal Research, East China Normal University, 2011-2014;
Assistant professor, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China, 2005-2011;
Personal Details :
Research Interests:
Present interests focus on the evolutionary response of some marine organisms (e.g. fishes‚ crabs, shrimps, phytoplankton and zooplankton) to fluctuating palaeo-climatic and oceanographic conditions including the following fields:
1. Demographic history and genetic population structure of some coastal species in the marginal seas of West Pacific;
2. Dispersal origin and colonization pathway of some widely distributed species in the Indo-West Pacific;
3. Changing species composition of phytoplankton and zooplankton through time in the sedimental cores.
Achivements：
He Lijun*, Mukai Takahiko, Chu Ka Hou, Ma Qiang, Zhang Jing (2015) Biogeographical role of the Kuroshio Current in the amphibious mudskipper Periophthalmus modestus indicated by mitochondrial DNA data. Scientific Reports, 5, 15645; doi: 10.1038/srep15645.
HE Lijun*, Zhang Aibing, Weese David, Li Shenfa, Li Jiansheng, Zhang Jing (2014) Demographic response of cutlassfish (Trichiurus japonicus and T. nanhaiensis) to fluctuating palaeo-climate and regional oceanographic conditions in the China seas. Scientific Reports, 4, 6380; DOI:10.1038/srep06380.
He Lijun*, Zhang Aibing, Zhu Chaodong, Weese David and Qiao Zhenguo. (2011) Phylogeography of the mud crab (Scylla serrata) in the Indo-West Pacific reappraised from mitochondrial molecular and oceanographic clues: Transoceanic dispersal and coastal sequential colonization. Marine Ecology, 32(1), 52-64.
He Lijun*, Zhang Aibing, Weese David, Zhu Chaodong, Jiang Chaojun, Qiao Zhenguo (2010) Late Pleistocene expansion of Scylla paramamosain along the coast of China: a population dynamic response to the Last Interglacial sea level highstand.Journal of Experimental Marine Biology and Ecology, 385, 20-28.
Projects:
1. 2009-2011, National Natural Science Foundation of China (No. 30800117), “Population genetic structure and historical phylogeography of hairtail (Trichiurus haumela) in the Chinese seas”. Role: PI.
2. 2007-2010, project No. 2007M04 from special research fund for the national non-profit institutes (East China Sea Fisheries Research Institute), “Ecological adaptability, species identification and biogeographic history of mudskippers along the Chinese coast”. Role: PI.
3. 2007-2009, open fund LFB20070603 from the Key Lab of Freshwater Fish Germplasm and Biotechnology, Chinese Ministry of Agriculture, “Ecological adaptability and population genetic structure of invasive red swamp crayfish (Procambarus clarkii) in mainland China ”. Role: PI.
4. 2005-2008, Shanghai Natural Science Foundation (No. 05ZR14158), “Population structure and phylogeographic history of mud crabs (Scylla spp.) in the Indo-West Pacific”. Role: PI.
5. 2005-2008, open fund 467 from Key and Open Laboratory of Marine and Estuarine Fisheries, Chinese Ministry of Agriculture, “Nuclear inserted mitochondrial pseudogenes (numts) in mud crabs (genus Scylla)”. Role: PI.
2. 2007-2010, project No. 2007M04 from special research fund for the national non-profit institutes (East China Sea Fisheries Research Institute), “Ecological adaptability, species identification and biogeographic history of mudskippers along the Chinese coast”. Role: PI.
3. 2007-2009, open fund LFB20070603 from the Key Lab of Freshwater Fish Germplasm and Biotechnology, Chinese Ministry of Agriculture, “Ecological adaptability and population genetic structure of invasive red swamp crayfish (Procambarus clarkii) in mainland China ”. Role: PI.
4. 2005-2008, Shanghai Natural Science Foundation (No. 05ZR14158), “Population structure and phylogeographic history of mud crabs (Scylla spp.) in the Indo-West Pacific”. Role: PI.
5. 2005-2008, open fund 467 from Key and Open Laboratory of Marine and Estuarine Fisheries, Chinese Ministry of Agriculture, “Nuclear inserted mitochondrial pseudogenes (numts) in mud crabs (genus Scylla)”. Role: PI.
Paper:
2024
He Lijun*, Bi Yonghong, Weese David, Wu Jie, Xu Shasha, Ren Huimin, Zhang Fenfen, Liu Xueqing, Chen Lei, Zhang Jing (2024). Genetic Signature of River Capture Imprinted in Schizopygopsis Fish from the Eastern Tibetan Plateau. Genes, 2024, 15, 1148. https://doi.org/10.3390/genes 15091148.
2022
He Lijun*, Xu Shasha, Weese David, Zhang Jie, Ren Huimin, Tang Fenghua, Sha Zhongli* and Zhang Jing (2022) Biogeographic role of Indonesian Seaway implicated by the colonization history of purpleback flying squid, Sthenoteuthis oualaniensis (Lesson, 1830), in the Indo-Pacific Ocean. Frontiers in Marine Science, 9: 891236. doi: 10.3389/fmars.2022.891236
2021
He Lijun*, Ren Huimin, Xu Shasha, Zhang Jing (2021) Phylogeographic pattern of marine fauna in the Indo-West Pacific. Oceanologia Et Limnologia Sinica, 52(2), 468-486.
Ren Huimin, Zhang Heng, Xu Shasha, Li Shengfa, Li Jiansheng, Li Zhihong, He Lijun* (2021) Population genetic structure and historical dynamics of Trachurus japonicus in the China seas based on mitochondrial control region. Journal of Tropical Oceanography, 40(5), 36-44.
Xu Shasha, Tang Fenghua, Ren Huimin, Li Zhihong, He Lijun* (2021) Phylogenetic relationship of Sthenoteuthis oualaniensis in the eastern Indian Ocean based on Cyt b gene. Journal of Shanghai Ocean University, 30(6), 45-55.
2018
Kuldeep D More, William D Orsi, Valier Galy, Liviu Giosan, Lijun He, Kliti Grice, Marco JL Coolen (2018) A 43 kyr record of protist communities and their response to oxygen minimum zone variability in the Northeastern Arabian Sea. Earth and Planetary Science Letters, 496, 248–256.
2017
Orsi William D., Coolen Marco J. L., Wuchter Cornelia, He Lijun, More Kuldeep D., Irigoien Xabier, Chust Guillem, Johnson Carl, Hemingway Jordon D., Lee Mitchell, Galy Valier, Giosan Liviu (2017) Climate oscillations reflected within the microbiome of Arabian Sea sediments. Scientific Reports, 7, 6040; doi:10.1038/s41598-017-05590-9.
2015
He Lijun*, Mukai Takahiko, Chu Ka Hou, Ma Qiang, Zhang Jing (2015) Biogeographical role of the Kuroshio Current in the amphibious mudskipper Periophthalmus modestus indicated by mitochondrial DNA data. Scientific Reports, 5, 15645; doi: 10.1038/srep15645.
2014
HE Lijun*, Zhang Aibing, Weese David, Li Shenfa, Li Jiansheng, Zhang Jing (2014) Demographic response of cutlassfish (Trichiurus japonicus and T. nanhaiensis) to fluctuating palaeo-climate and regional oceanographic conditions in the China seas. Scientific Reports, 4, 6380; DOI:10.1038/srep06380.
HE Lijun*, Zhang Aibing, Weese David, Li Shenfa, Li Jiansheng, Zhang Jing (2014) Demographic response of cutlassfish (Trichiurus japonicus and T. nanhaiensis) to fluctuating palaeo-climate and regional oceanographic conditions in the China seas. Scientific Reports, 4, 6380; DOI:10.1038/srep06380.
2013
Tang Fenghua, Wang Jinglong, Liu Dantong, He Lijun, Du Jinzhou* (2013) Distribution of Fukushima Accident-derived Radionuclides in Neon flying squid in the North Pacific Ocean. Journal of Agro-environment Science, 32(10), 2066-2071. (in Chinese)
Tang Fenghua, Wang Jinglong, Liu Dantong, He Lijun, Du Jinzhou* (2013) Distribution of Fukushima Accident-derived Radionuclides in Neon flying squid in the North Pacific Ocean. Journal of Agro-environment Science, 32(10), 2066-2071. (in Chinese)
2012
Jin Qian, He Lijun, Zhang Aibing* (2012) A simple 2D non-parametric resampling statistical approach to assess confidence in species identification in DNA Barcoding—An alternative to likelihood and Bayesian approaches. PLoS ONE 7(12): e50831. doi:10.1371/journal.pone.0050831
Yang Fan, HE Lijun, Lei Guangchun*, Zhang Aibing (2012) Genetic diversity and DNA barcoding of mudskipper common species along southeast coasts of China. Chinese Journal of Ecology, 31(3), 676-683. (in Chinese)
Jin Qian, He Lijun, Zhang Aibing* (2012) A simple 2D non-parametric resampling statistical approach to assess confidence in species identification in DNA Barcoding—An alternative to likelihood and Bayesian approaches. PLoS ONE 7(12): e50831. doi:10.1371/journal.pone.0050831
Yang Fan, HE Lijun, Lei Guangchun*, Zhang Aibing (2012) Genetic diversity and DNA barcoding of mudskipper common species along southeast coasts of China. Chinese Journal of Ecology, 31(3), 676-683. (in Chinese)
2011
He Lijun*, Zhang Aibing, Zhu Chaodong, Weese David and Qiao Zhenguo. (2011) Phylogeography of the mud crab (Scylla serrata) in the Indo-West Pacific reappraised from mitochondrial molecular and oceanographic clues: Transoceanic dispersal and coastal sequential colonization. Marine Ecology, 32(1), 52-64.
He Lijun*, Zhang Aibing, Zhu Chaodong, Weese David and Qiao Zhenguo. (2011) Phylogeography of the mud crab (Scylla serrata) in the Indo-West Pacific reappraised from mitochondrial molecular and oceanographic clues: Transoceanic dispersal and coastal sequential colonization. Marine Ecology, 32(1), 52-64.
2010
He Lijun*, Zhang Aibing, Weese David, Zhu Chaodong, Jiang Chaojun, Qiao Zhenguo (2010) Late Pleistocene expansion of Scylla paramamosain along the coast of China: a population dynamic response to the Last Interglacial sea level highstand.Journal of Experimental Marine Biology and Ecology, 385, 20-28.
He Lijun*, Zhang Aibing, Zhu Chaodong, Liu Jianyi (2010) Genetic imprints of Paleo-oceanographic conditions in the Chinese seas: Population bottlenecks of Scylla paramamosain and Periophthalmus modestus inferred from mitochondrial genes. Journal of Earth Science, 21, special issue, 237-240.
Zhang Aibing*, He Lijun, Crozier R.H., Muster C. and Zhu Chaodong (2010) Estimating sample sizes for DNA barcoding. Molecular Phylogenetics and Evolution, 54(3), 1035-1039.
He Lijun*, Zhang Aibing, Weese David, Zhu Chaodong, Jiang Chaojun, Qiao Zhenguo (2010) Late Pleistocene expansion of Scylla paramamosain along the coast of China: a population dynamic response to the Last Interglacial sea level highstand.Journal of Experimental Marine Biology and Ecology, 385, 20-28.
He Lijun*, Zhang Aibing, Zhu Chaodong, Liu Jianyi (2010) Genetic imprints of Paleo-oceanographic conditions in the Chinese seas: Population bottlenecks of Scylla paramamosain and Periophthalmus modestus inferred from mitochondrial genes. Journal of Earth Science, 21, special issue, 237-240.
Zhang Aibing*, He Lijun, Crozier R.H., Muster C. and Zhu Chaodong (2010) Estimating sample sizes for DNA barcoding. Molecular Phylogenetics and Evolution, 54(3), 1035-1039.
2008
Hu Linlin, Fang Wenhong*，Liang Sicheng，Wang Kaiyu, HE Lijun (2008) Isolation, identification and drug sensitive test of Aeromonas sobria from goldfish. Journal of Shanghai Fisheries University, 17(3), 285-290. (in Chinese)
Hu Linlin, Fang Wenhong*，Liang Sicheng，Wang Kaiyu, HE Lijun (2008) Isolation, identification and drug sensitive test of Aeromonas sobria from goldfish. Journal of Shanghai Fisheries University, 17(3), 285-290. (in Chinese)
2007
Shi Chengming, Huang Zushi, Wang Lei, He Lijun, Hua Yueping, Len Liang, Zhang Dexing* (2007) Geographical distribution of two species of Mesobuthus (Scorpiones, Buthidae) in China: insights from systematic field surveys and predictive models. Journal of Arachnology, 35, 215-226.
Shi Chengming, Huang Zushi, Wang Lei, He Lijun, Hua Yueping, Len Liang, Zhang Dexing* (2007) Geographical distribution of two species of Mesobuthus (Scorpiones, Buthidae) in China: insights from systematic field surveys and predictive models. Journal of Arachnology, 35, 215-226.
2006
Ma Lingbo*, Zhang Fengying, Qiao Zhenguo, He Lijun, Ma Chunyan (2006) Sequence analysis of mitochondrial COI gene of Scylla spp．along coast of southeastern China. Journal of Fisheries of China, 30(4), 463-468. (in Chinese)
Ma Lingbo*, Zhang Fengying, Qiao Zhenguo, He Lijun, Ma Chunyan (2006) Sequence analysis of mitochondrial COI gene of Scylla spp．along coast of southeastern China. Journal of Fisheries of China, 30(4), 463-468. (in Chinese)
2003
Ji Yajie, Zhang Dexing* and He Lijun (2003) Evolutionary conservation and versatility of a new set of primers for amplifying the ribosomal internal transcribed spacer regions in insects and other invertebrates. Molecular Ecology Notes, 3(4), 581.
Ding Youzhong, Wang Xiaoming*, He Lijun, Wang Zhenhuan, Wu Wei, Tao Fengyong, Shao Min (2003) Position of Burrow Entrances in Wild Chinese Alligators. Zoological Research, 24 (4),254 258. (in Chinese)
Ji Yajie, Zhang Dexing* and He Lijun (2003) Evolutionary conservation and versatility of a new set of primers for amplifying the ribosomal internal transcribed spacer regions in insects and other invertebrates. Molecular Ecology Notes, 3(4), 581.
Ding Youzhong, Wang Xiaoming*, He Lijun, Wang Zhenhuan, Wu Wei, Tao Fengyong, Shao Min (2003) Position of Burrow Entrances in Wild Chinese Alligators. Zoological Research, 24 (4),254 258. (in Chinese)
2002
Wu wei, Wang Xiaoming*, He Lijun, Zhang Kejia, Xu Jianzhong, Shen Zhiguo (2002) Squuirrel monkey (Saimiri sciureus) behavior time budget under artificial breeding environment. Sichuan Journal of Zoology, 21(4), 219-222. (in Chinese)
He Lijun, Wang Xiaoming*, Ding Youzhong, Shao Min, Wang Guohong, Xie Wanshu, Thorbjarnarson John (2002) Influence of temperature on egg incubation of the wild Chinese alligator (Alligator sinensis). Acta Zoologica Sinica, 48(3), 420-424. (in Chinese)
He Lijun, Ding Youzhong, Li Xiuhong, Hu Linying, Wang Xiaoming*, Shao Min,Xie Wanshu, Thorbjamarson John, Gu Changmin (2002) The research on the Chinese alligator population and habitat quality in Nanling county，Anhui province.Chinese Journal of Zoology, 37(1), 31-35. (in Chinese)
Thorbjarnarson John*, Wang Xiaoming, Shao Min, He Lijun, Ding Youzhong, McMurry Scott (2002) Wild population of Chinese alligator approach extinction. Biological Conservation, 103(1), 93-102.
Wu wei, Wang Xiaoming*, He Lijun, Zhang Kejia, Xu Jianzhong, Shen Zhiguo (2002) Squuirrel monkey (Saimiri sciureus) behavior time budget under artificial breeding environment. Sichuan Journal of Zoology, 21(4), 219-222. (in Chinese)
He Lijun, Wang Xiaoming*, Ding Youzhong, Shao Min, Wang Guohong, Xie Wanshu, Thorbjarnarson John (2002) Influence of temperature on egg incubation of the wild Chinese alligator (Alligator sinensis). Acta Zoologica Sinica, 48(3), 420-424. (in Chinese)
He Lijun, Ding Youzhong, Li Xiuhong, Hu Linying, Wang Xiaoming*, Shao Min,Xie Wanshu, Thorbjamarson John, Gu Changmin (2002) The research on the Chinese alligator population and habitat quality in Nanling county，Anhui province.Chinese Journal of Zoology, 37(1), 31-35. (in Chinese)
Thorbjarnarson John*, Wang Xiaoming, Shao Min, He Lijun, Ding Youzhong, McMurry Scott (2002) Wild population of Chinese alligator approach extinction. Biological Conservation, 103(1), 93-102.
2001
Thorbjarnarson John*, Wang Xiaoming, He Lijun (2001) Reproductive ecology of the Chinese alligator (Alligator sinensis） andimplications for conservation. Journal of Herpetology, 35(4), 553-558.
Ding Youzhong, Wang Xiaoming*, He Lijun, Shao Min, Xie Wanshu, Thorbjarnarson B John, McMurry T Scott (2001) Study on the current population and habitat of the wild Chinese alligator (Alligator sinensis). Biodiversity Science, 9 (2), 102-108. (in Chinese)
Ding Youzhong, Wang Xiaoming*, He Lijun,Wang Renping, Xie Wanshu, Shao Min, Thorbjarnarson B John (2001) A Primelinary Study on Heavy Metal Elements (Cu, Zn, Cd and Pb) in Different Parts of the Eggs of Chinese Alligator (Alligator sinensis). Zoological Research, 22(3), 253-256. (in Chinese)
He Lijun, Ding Youzhong, Wang Xiaoming*, Xia Shuzhong (2001) Time Budget and behavior pattern of Cervus albirostrisin captivity. Chinese Journal of Ecology, 20 (2), 27-29. (in Chinese)
Thorbjarnarson John*, Wang Xiaoming, He Lijun (2001) Reproductive ecology of the Chinese alligator (Alligator sinensis） andimplications for conservation. Journal of Herpetology, 35(4), 553-558.
Ding Youzhong, Wang Xiaoming*, He Lijun, Shao Min, Xie Wanshu, Thorbjarnarson B John, McMurry T Scott (2001) Study on the current population and habitat of the wild Chinese alligator (Alligator sinensis). Biodiversity Science, 9 (2), 102-108. (in Chinese)
Ding Youzhong, Wang Xiaoming*, He Lijun,Wang Renping, Xie Wanshu, Shao Min, Thorbjarnarson B John (2001) A Primelinary Study on Heavy Metal Elements (Cu, Zn, Cd and Pb) in Different Parts of the Eggs of Chinese Alligator (Alligator sinensis). Zoological Research, 22(3), 253-256. (in Chinese)
He Lijun, Ding Youzhong, Wang Xiaoming*, Xia Shuzhong (2001) Time Budget and behavior pattern of Cervus albirostrisin captivity. Chinese Journal of Ecology, 20 (2), 27-29. (in Chinese)
2000
He Lijun, Ding Youzhong, Xia Shuzhong, Wang Xiaoming* (2000) Behavior observation of White-lipped deer (Cervus albirostris) in captivity. Chinese Journal of Zoology, 35(2), 27－31. (in Chinese)
He Lijun, Ding Youzhong, Xia Shuzhong, Wang Xiaoming* (2000) Behavior observation of White-lipped deer (Cervus albirostris) in captivity. Chinese Journal of Zoology, 35(2), 27－31. (in Chinese)
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